Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917123.1_cds_XP_016466779.1_59596
CDS Infomation

[gene=LOC107789473] [db_xref=GeneID:107789473] [protein=DNA polymerase epsilon subunit 2-like] [protein_id=XP_016466779.1] [location=join(50619..50784,50878..51058,52332..52485,52603..52734,53251..53328,53768..53872,53976..54056,54162..54292,54385..54479,54567..54666,54939..55053,55142..55252,55667..55807)] [gbkey=CDS]
Sequence

ATGAGCGGAGTTGTAAGGAACAAAGTACAGAGGAAGTTCAAGATGAGGGGTTACTCTCTC
AAAGTTGACGCTCTTTCCGAAGTCCTCTCTTTCCTTTCCCATTTTCCTTCCGATGCCCTC
GACGACGCTCTTGAACTCCTTCTCGATGAGCTGCACCATCTCTCTTTGAAATCAGCGATT
CTGGACAGAGAGCCGGTTCATAAAGTGGCGAGTCTTTTATTGGAGGCAGAAGCCGCCGTT
GAGGAGAACCCTAGCTCCAGTTCATCATCTGCTTCTGCCCTTCGTATTACTGATGCTTTT
ATTGTTCCTAAATTCCGATACGATCCTGTTAAGAAGTTCTTTCACGAGCACACAGGGCGG
CTTTCCATTCACGGTGATGCCTCTGCAAAAGCCACCTTATATAAGGATAGATTCCTCTTA
TTATTCCAGAGGTTATCTCGTGATCCACGGTTTTCAACCCTTGCTTTTGATGCCCCTACT
TCAGAGTATGGCAGCTGTGAGATATCTCCCATTCAATCTCTTGTTGGGCGGGTAGGGAGA
AGATGGATAATGGGTGTAATATCTCAGTTGGAGGATGATCATTTCTACTTGGAAGACCTT
ACTGCAGCTGTTGAAGTTAATTTATCTAGTGCAAAGATAACCACAGGTTTCTTTGCGGAA
AATACAATCGTCCTGGCAGAAGGTGAAATGCAGTTGGATGGTGTCTTTCAGGTCAGGACA
TGTGGATTTCCTCCATTAGAGGACAGAGAAAAGTCCATGGCATTTTTTTCAGGACTAGAC
TTCTTTGGTGGTGGTATTCTTACCAAAGAGGAAACTCTTAGACTTGCAGAGCTGGAGAAA
AAAGCTGTGAATGACATGTTTGTTATACTATCTGATATCTGGCTGGACAATGAGGAGACT
TTGGGAAATCTGGAGACTATCCTCAATGGTTATGAAAATGTAGAGGTGGTTCCTTCTTTA
TTTGTCCTCATGGGGAATTTCTGCTCTCAGCCATTTAATCTTTCCTTCAAGTCAATCTCA
AGTCTCAGGGTTCAGTTTGGAAAGCTTGGGCAAATGATTGCCTCGCACCAACGACTAAAA
GAGCATAGTCGATTTCTGTTTATCCCTGGTCCTGATGATGTAGGTCCTTCAACAGTCTTA
CCCAGATGTCCTTTGCCCAAATACCTAACTGAAGAACTTCAGAAATATGTTCCCAATGCA
ATATTCTCCAGTAACCCATGCAGAATCAAGTTTTATACCCAAGAAATTGTACTATTCCGC
CAAGATTTGCTTTATAGAATGCGAAGGTCATGTTTGATACCTCCCTCAACAGAAGAAACC
AGTGATCCATTTGAGCATCTTGTTGCGACGATAATACATCAGAGCCATCTCTGCCCCCTT
CCTTTGACAGGTCAACCCATTATCTGGAATTATGATCACAGTCTACACCTTTATCCAACC
CCGCATACGATAGTGTTGGGGGACAAAAGTGAGCAGAAGGCTTTCAGGTACACAGGAGTT
ACATGCTTTAATCCTGGTTCCTTCTCAAATGATGGCACATTTGTGGCATATCGGCCGTGC
AATCAGGAAGTAGAACTATCTGCATTGTAA

Peptide Sequence

PEP ID

XP_016466779.1
PEP Infomation

PREDICTED: DNA polymerase epsilon subunit 2-like [Nicotiana tabacum]
Sequence

MSGVVRNKVQRKFKMRGYSLKVDALSEVLSFLSHFPSDALDDALELLLDELHHLSLKSAI
LDREPVHKVASLLLEAEAAVEENPSSSSSSASALRITDAFIVPKFRYDPVKKFFHEHTGR
LSIHGDASAKATLYKDRFLLLFQRLSRDPRFSTLAFDAPTSEYGSCEISPIQSLVGRVGR
RWIMGVISQLEDDHFYLEDLTAAVEVNLSSAKITTGFFAENTIVLAEGEMQLDGVFQVRT
CGFPPLEDREKSMAFFSGLDFFGGGILTKEETLRLAELEKKAVNDMFVILSDIWLDNEET
LGNLETILNGYENVEVVPSLFVLMGNFCSQPFNLSFKSISSLRVQFGKLGQMIASHQRLK
EHSRFLFIPGPDDVGPSTVLPRCPLPKYLTEELQKYVPNAIFSSNPCRIKFYTQEIVLFR
QDLLYRMRRSCLIPPSTEETSDPFEHLVATIIHQSHLCPLPLTGQPIIWNYDHSLHLYPT
PHTIVLGDKSEQKAFRYTGVTCFNPGSFSNDGTFVAYRPCNQEVELSAL

Transcript Sequence

Gene sequence data has not been registered.